{
 "cells": [
  {
   "cell_type": "markdown",
   "metadata": {},
   "source": [
    "**WARNING:  This document will not render correctly using nbviewer or nbconvert.  To render this notebook correctly, open in `IPython Notebook` and run `Cell->Run All` from the menu bar.**"
   ]
  },
  {
   "cell_type": "markdown",
   "metadata": {},
   "source": [
    "# Introduction"
   ]
  },
  {
   "cell_type": "markdown",
   "metadata": {},
   "source": [
    "The IPython Notebook allows Markdown, HTML, and inline LaTeX in *Mardown Cells*.  The inline LaTeX is parsed with [MathJax](http://www.mathjax.org/) and Markdown is parsed with [marked](https://github.com/chjj/marked).  Any inline HTML is left to the web browser to parse.  NBConvert is a utility that allows users to easily convert their notebooks to various formats.  Pandoc is used to parse markdown text in NBConvert.  Since what the notebook web interface supports is a mix of Markdown, HTML, and LaTeX, Pandoc has trouble converting notebook markdown. This results in incomplete representations of the notebook in nbviewer or a compiled Latex PDF.\n",
    "\n",
    "This isn't a Pandoc flaw; Pandoc isn't designed to parse and convert a mixed format document.  Unfortunately, this means that Pandoc can only support a subset of the markup supported in the notebook web interface.  This notebook compares output of Pandoc to the notebook web interface.\n",
    "\n",
    "**Changes:**\n",
    "\n",
    "05102013\n",
    "\n",
    " * heading anchors\n",
    " * note on remote images\n",
    "\n",
    "06102013\n",
    "\n",
    " * remove strip_math_space filter\n",
    " * add lxml test\n",
    " \n",
    "<style>\n",
    " .rendered_html xmp { \n",
    " white-space: pre-wrap;\n",
    " }\n",
    "</style>"
   ]
  },
  {
   "cell_type": "markdown",
   "metadata": {},
   "source": [
    "## Utilities"
   ]
  },
  {
   "cell_type": "markdown",
   "metadata": {},
   "source": [
    "Define functions to render Markdown using the notebook and Pandoc."
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 1,
   "metadata": {
    "collapsed": false
   },
   "outputs": [],
   "source": [
    "from IPython.nbconvert.utils.pandoc import pandoc\n",
    "from IPython.display import HTML, Javascript, display\n",
    "\n",
    "from IPython.nbconvert.filters import citation2latex, strip_files_prefix, \\\n",
    "                                     markdown2html, markdown2latex\n",
    "\n",
    "def pandoc_render(markdown):\n",
    "    \"\"\"Render Pandoc Markdown->LaTeX content.\"\"\"\n",
    "    \n",
    "    ## Convert the markdown directly to latex.  This is what nbconvert does.\n",
    "    #latex = pandoc(markdown, \"markdown\", \"latex\")\n",
    "    #html = pandoc(markdown, \"markdown\", \"html\", [\"--mathjax\"])\n",
    "    \n",
    "    # nbconvert template conversions\n",
    "    html = strip_files_prefix(markdown2html(markdown))\n",
    "    latex = markdown2latex(citation2latex(markdown))\n",
    "    display(HTML(data=\"<div style='display: inline-block; width: 30%; vertical-align: top;'>\" \\\n",
    "                 \"<div style='background: #AAFFAA; width: 100%;'>NBConvert Latex Output</div>\" \\\n",
    "                 \"<pre class='prettyprint lang-tex' style='background: #EEFFEE; border: 1px solid #DDEEDD;'><xmp>\" + latex + \"</xmp></pre>\"\\\n",
    "                 \"</div>\" \\\n",
    "                 \"<div style='display: inline-block; width: 2%;'></div>\" \\\n",
    "                 \"<div style='display: inline-block; width: 30%; vertical-align: top;'>\" \\\n",
    "                 \"<div style='background: #FFAAAA; width: 100%;'>NBViewer Output</div>\" \\\n",
    "                 \"<div style='display: inline-block; width: 100%;'>\" + html + \"</div>\" \\\n",
    "                 \"</div>\"))\n",
    "    javascript = \"\"\"\n",
    "    $.getScript(\"https://google-code-prettify.googlecode.com/svn/loader/run_prettify.js\");\n",
    "\"\"\"\n",
    "    display(Javascript(data=javascript))\n",
    "\n",
    "def notebook_render(markdown):\n",
    "    javascript = \"\"\"\n",
    "var mdcell = new IPython.MarkdownCell();\n",
    "mdcell.create_element();\n",
    "mdcell.set_text('\"\"\" + markdown.replace(\"\\\\\", \"\\\\\\\\\").replace(\"'\", \"\\'\").replace(\"\\n\", \"\\\\n\") + \"\"\"');\n",
    "mdcell.render();\n",
    "$(element).append(mdcell.element)\n",
    ".removeClass()\n",
    ".css('left', '66%')\n",
    ".css('position', 'absolute')\n",
    ".css('width', '30%')\n",
    "mdcell.element.prepend(\n",
    "    $('<div />')\n",
    "    .removeClass()\n",
    "    .css('background', '#AAAAFF')\n",
    "    .css('width', '100 %')\n",
    "    .html('Notebook Output')\n",
    "\n",
    ");\n",
    "container.show()\n",
    "\"\"\"\n",
    "    display(Javascript(data=javascript))\n",
    "\n",
    "    \n",
    "def pandoc_html_render(markdown):\n",
    "    \"\"\"Render Pandoc Markdown->LaTeX content.\"\"\"\n",
    "    \n",
    "    # Convert the markdown directly to latex.  This is what nbconvert does.\n",
    "    latex = pandoc(markdown, \"markdown\", \"latex\")\n",
    "    \n",
    "    # Convert the pandoc generated latex to HTML so it can be rendered in \n",
    "    # the web browser.\n",
    "    html = pandoc(latex, \"latex\", \"html\", [\"--mathjax\"])\n",
    "    display(HTML(data=\"<div style='background: #AAFFAA; width: 40%;'>HTML Pandoc Output</div>\" \\\n",
    "                 \"<div style='display: inline-block; width: 40%;'>\" + html + \"</div>\"))\n",
    "    return html\n",
    "    \n",
    "def compare_render(markdown):\n",
    "    notebook_render(markdown)\n",
    "    pandoc_render(markdown)"
   ]
  },
  {
   "cell_type": "markdown",
   "metadata": {},
   "source": [
    "# Outputs"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 1,
   "metadata": {
    "collapsed": false
   },
   "outputs": [
    {
     "name": "stdout",
     "output_type": "stream",
     "text": [
      "LXML found!\n"
     ]
    }
   ],
   "source": [
    "try:\n",
    "    import lxml\n",
    "    print 'LXML found!'\n",
    "except:\n",
    "    print 'Warning! No LXML found - the old citation2latex filter will not work'"
   ]
  },
  {
   "cell_type": "markdown",
   "metadata": {},
   "source": [
    "## General markdown"
   ]
  },
  {
   "cell_type": "markdown",
   "metadata": {},
   "source": [
    "Heading level 6 is not supported by Pandoc."
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 2,
   "metadata": {
    "collapsed": false
   },
   "outputs": [
    {
     "data": {
      "application/javascript": [
       "\n",
       "var mdcell = new IPython.MarkdownCell();\n",
       "mdcell.create_element();\n",
       "mdcell.set_text('\\n\\n# Heading 1 \\n## Heading 2 \\n### Heading 3 \\n#### Heading 4 \\n##### Heading 5 \\n###### Heading 6');\n",
       "mdcell.render();\n",
       "$(element).append(mdcell.element)\n",
       ".removeClass()\n",
       ".css('left', '66%')\n",
       ".css('position', 'absolute')\n",
       ".css('width', '30%')\n",
       "mdcell.element.prepend(\n",
       "    $('<div />')\n",
       "    .removeClass()\n",
       "    .css('background', '#AAAAFF')\n",
       "    .css('width', '100 %')\n",
       "    .html('Notebook Output')\n",
       "\n",
       ");\n",
       "container.show()\n"
      ],
      "text/plain": [
       "<IPython.core.display.Javascript at 0x21ac2d0>"
      ]
     },
     "metadata": {},
     "output_type": "display_data"
    },
    {
     "data": {
      "text/html": [
       "<div style='display: inline-block; width: 30%; vertical-align: top;'><div style='background: #AAFFAA; width: 100%;'>NBConvert Latex Output</div><pre class='prettyprint lang-tex' style='background: #EEFFEE; border: 1px solid #DDEEDD;'><xmp>\\section{Heading 1}\n",
       "\n",
       "\\subsection{Heading 2}\n",
       "\n",
       "\\subsubsection{Heading 3}\n",
       "\n",
       "\\paragraph{Heading 4}\n",
       "\n",
       "\\subparagraph{Heading 5}\n",
       "\n",
       "Heading 6</xmp></pre></div><div style='display: inline-block; width: 2%;'></div><div style='display: inline-block; width: 30%; vertical-align: top;'><div style='background: #FFAAAA; width: 100%;'>NBViewer Output</div><div style='display: inline-block; width: 100%;'><h1 id=\"heading-1\">Heading 1</h1>\n",
       "<h2 id=\"heading-2\">Heading 2</h2>\n",
       "<h3 id=\"heading-3\">Heading 3</h3>\n",
       "<h4 id=\"heading-4\">Heading 4</h4>\n",
       "<h5 id=\"heading-5\">Heading 5</h5>\n",
       "<h6 id=\"heading-6\">Heading 6</h6></div></div>"
      ],
      "text/plain": [
       "<IPython.core.display.HTML at 0x21b9fd0>"
      ]
     },
     "metadata": {},
     "output_type": "display_data"
    },
    {
     "data": {
      "application/javascript": [
       "\n",
       "    $.getScript(\"https://google-code-prettify.googlecode.com/svn/loader/run_prettify.js\");\n"
      ],
      "text/plain": [
       "<IPython.core.display.Javascript at 0x21b9fd0>"
      ]
     },
     "metadata": {},
     "output_type": "display_data"
    }
   ],
   "source": [
    "compare_render(r\"\"\"\n",
    "\n",
    "# Heading 1 \n",
    "## Heading 2 \n",
    "### Heading 3 \n",
    "#### Heading 4 \n",
    "##### Heading 5 \n",
    "###### Heading 6\"\"\")"
   ]
  },
  {
   "cell_type": "markdown",
   "metadata": {},
   "source": [
    "Headers aren't recognized by (Pandoc on Windows?) if there isn't a blank line above the headers."
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 3,
   "metadata": {
    "collapsed": false
   },
   "outputs": [
    {
     "data": {
      "application/javascript": [
       "\n",
       "var mdcell = new IPython.MarkdownCell();\n",
       "mdcell.create_element();\n",
       "mdcell.set_text('\\n# Heading 1 \\n## Heading 2 \\n### Heading 3 \\n#### Heading 4 \\n##### Heading 5 \\n###### Heading 6 ');\n",
       "mdcell.render();\n",
       "$(element).append(mdcell.element)\n",
       ".removeClass()\n",
       ".css('left', '66%')\n",
       ".css('position', 'absolute')\n",
       ".css('width', '30%')\n",
       "mdcell.element.prepend(\n",
       "    $('<div />')\n",
       "    .removeClass()\n",
       "    .css('background', '#AAAAFF')\n",
       "    .css('width', '100 %')\n",
       "    .html('Notebook Output')\n",
       "\n",
       ");\n",
       "container.show()\n"
      ],
      "text/plain": [
       "<IPython.core.display.Javascript at 0x21ac550>"
      ]
     },
     "metadata": {},
     "output_type": "display_data"
    },
    {
     "data": {
      "text/html": [
       "<div style='display: inline-block; width: 30%; vertical-align: top;'><div style='background: #AAFFAA; width: 100%;'>NBConvert Latex Output</div><pre class='prettyprint lang-tex' style='background: #EEFFEE; border: 1px solid #DDEEDD;'><xmp>\\section{Heading 1}\n",
       "\n",
       "\\subsection{Heading 2}\n",
       "\n",
       "\\subsubsection{Heading 3}\n",
       "\n",
       "\\paragraph{Heading 4}\n",
       "\n",
       "\\subparagraph{Heading 5}\n",
       "\n",
       "Heading 6</xmp></pre></div><div style='display: inline-block; width: 2%;'></div><div style='display: inline-block; width: 30%; vertical-align: top;'><div style='background: #FFAAAA; width: 100%;'>NBViewer Output</div><div style='display: inline-block; width: 100%;'><h1 id=\"heading-1\">Heading 1</h1>\n",
       "<h2 id=\"heading-2\">Heading 2</h2>\n",
       "<h3 id=\"heading-3\">Heading 3</h3>\n",
       "<h4 id=\"heading-4\">Heading 4</h4>\n",
       "<h5 id=\"heading-5\">Heading 5</h5>\n",
       "<h6 id=\"heading-6\">Heading 6</h6></div></div>"
      ],
      "text/plain": [
       "<IPython.core.display.HTML at 0x21ac550>"
      ]
     },
     "metadata": {},
     "output_type": "display_data"
    },
    {
     "data": {
      "application/javascript": [
       "\n",
       "    $.getScript(\"https://google-code-prettify.googlecode.com/svn/loader/run_prettify.js\");\n"
      ],
      "text/plain": [
       "<IPython.core.display.Javascript at 0x21ac550>"
      ]
     },
     "metadata": {},
     "output_type": "display_data"
    },
    {
     "name": "stdout",
     "output_type": "stream",
     "text": [
      "\n",
      "\n",
      "\n",
      "\n",
      "\n",
      "\n",
      "\n",
      "\n",
      "\n",
      "\n",
      "\n"
     ]
    }
   ],
   "source": [
    "compare_render(r\"\"\"\n",
    "# Heading 1 \n",
    "## Heading 2 \n",
    "### Heading 3 \n",
    "#### Heading 4 \n",
    "##### Heading 5 \n",
    "###### Heading 6 \"\"\")\n",
    "\n",
    "print(\"\\n\"*10)"
   ]
  },
  {
   "cell_type": "markdown",
   "metadata": {},
   "source": [
    "If internal links are defined, these will not work in nbviewer and latex as the local link is not existing."
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 4,
   "metadata": {
    "collapsed": false
   },
   "outputs": [
    {
     "data": {
      "application/javascript": [
       "\n",
       "var mdcell = new IPython.MarkdownCell();\n",
       "mdcell.create_element();\n",
       "mdcell.set_text('\\n[Link2Heading](http://127.0.0.1:8888/0a2d8086-ee24-4e5b-a32b-f66b525836cb#General-markdown)\\n');\n",
       "mdcell.render();\n",
       "$(element).append(mdcell.element)\n",
       ".removeClass()\n",
       ".css('left', '66%')\n",
       ".css('position', 'absolute')\n",
       ".css('width', '30%')\n",
       "mdcell.element.prepend(\n",
       "    $('<div />')\n",
       "    .removeClass()\n",
       "    .css('background', '#AAAAFF')\n",
       "    .css('width', '100 %')\n",
       "    .html('Notebook Output')\n",
       "\n",
       ");\n",
       "container.show()\n"
      ],
      "text/plain": [
       "<IPython.core.display.Javascript at 0x21ac210>"
      ]
     },
     "metadata": {},
     "output_type": "display_data"
    },
    {
     "data": {
      "text/html": [
       "<div style='display: inline-block; width: 30%; vertical-align: top;'><div style='background: #AAFFAA; width: 100%;'>NBConvert Latex Output</div><pre class='prettyprint lang-tex' style='background: #EEFFEE; border: 1px solid #DDEEDD;'><xmp>\\href{http://127.0.0.1:8888/0a2d8086-ee24-4e5b-a32b-f66b525836cb\\#General-markdown}{Link2Heading}</xmp></pre></div><div style='display: inline-block; width: 2%;'></div><div style='display: inline-block; width: 30%; vertical-align: top;'><div style='background: #FFAAAA; width: 100%;'>NBViewer Output</div><div style='display: inline-block; width: 100%;'><p><a href=\"http://127.0.0.1:8888/0a2d8086-ee24-4e5b-a32b-f66b525836cb#General-markdown\">Link2Heading</a></p></div></div>"
      ],
      "text/plain": [
       "<IPython.core.display.HTML at 0x21ac210>"
      ]
     },
     "metadata": {},
     "output_type": "display_data"
    },
    {
     "data": {
      "application/javascript": [
       "\n",
       "    $.getScript(\"https://google-code-prettify.googlecode.com/svn/loader/run_prettify.js\");\n"
      ],
      "text/plain": [
       "<IPython.core.display.Javascript at 0x21ac210>"
      ]
     },
     "metadata": {},
     "output_type": "display_data"
    }
   ],
   "source": [
    "compare_render(r\"\"\"\n",
    "[Link2Heading](http://127.0.0.1:8888/0a2d8086-ee24-4e5b-a32b-f66b525836cb#General-markdown)\n",
    "\"\"\")"
   ]
  },
  {
   "cell_type": "markdown",
   "metadata": {},
   "source": [
    "Basic Markdown bold and italic works."
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 5,
   "metadata": {
    "collapsed": false
   },
   "outputs": [
    {
     "data": {
      "application/javascript": [
       "\n",
       "var mdcell = new IPython.MarkdownCell();\n",
       "mdcell.create_element();\n",
       "mdcell.set_text('\\nThis is Markdown **bold** and *italic* text.\\n');\n",
       "mdcell.render();\n",
       "$(element).append(mdcell.element)\n",
       ".removeClass()\n",
       ".css('left', '66%')\n",
       ".css('position', 'absolute')\n",
       ".css('width', '30%')\n",
       "mdcell.element.prepend(\n",
       "    $('<div />')\n",
       "    .removeClass()\n",
       "    .css('background', '#AAAAFF')\n",
       "    .css('width', '100 %')\n",
       "    .html('Notebook Output')\n",
       "\n",
       ");\n",
       "container.show()\n"
      ],
      "text/plain": [
       "<IPython.core.display.Javascript at 0x21ac450>"
      ]
     },
     "metadata": {},
     "output_type": "display_data"
    },
    {
     "data": {
      "text/html": [
       "<div style='display: inline-block; width: 30%; vertical-align: top;'><div style='background: #AAFFAA; width: 100%;'>NBConvert Latex Output</div><pre class='prettyprint lang-tex' style='background: #EEFFEE; border: 1px solid #DDEEDD;'><xmp>This is Markdown \\textbf{bold} and \\emph{italic} text.</xmp></pre></div><div style='display: inline-block; width: 2%;'></div><div style='display: inline-block; width: 30%; vertical-align: top;'><div style='background: #FFAAAA; width: 100%;'>NBViewer Output</div><div style='display: inline-block; width: 100%;'><p>This is Markdown <strong>bold</strong> and <em>italic</em> text.</p></div></div>"
      ],
      "text/plain": [
       "<IPython.core.display.HTML at 0x21ac450>"
      ]
     },
     "metadata": {},
     "output_type": "display_data"
    },
    {
     "data": {
      "application/javascript": [
       "\n",
       "    $.getScript(\"https://google-code-prettify.googlecode.com/svn/loader/run_prettify.js\");\n"
      ],
      "text/plain": [
       "<IPython.core.display.Javascript at 0x21ac450>"
      ]
     },
     "metadata": {},
     "output_type": "display_data"
    }
   ],
   "source": [
    "compare_render(r\"\"\"\n",
    "This is Markdown **bold** and *italic* text.\n",
    "\"\"\")"
   ]
  },
  {
   "cell_type": "markdown",
   "metadata": {},
   "source": [
    "Nested lists work as well"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 6,
   "metadata": {
    "collapsed": false
   },
   "outputs": [
    {
     "data": {
      "application/javascript": [
       "\n",
       "var mdcell = new IPython.MarkdownCell();\n",
       "mdcell.create_element();\n",
       "mdcell.set_text('\\n- li 1\\n- li 2\\n    1. li 3\\n    1. li 4\\n- li 5\\n');\n",
       "mdcell.render();\n",
       "$(element).append(mdcell.element)\n",
       ".removeClass()\n",
       ".css('left', '66%')\n",
       ".css('position', 'absolute')\n",
       ".css('width', '30%')\n",
       "mdcell.element.prepend(\n",
       "    $('<div />')\n",
       "    .removeClass()\n",
       "    .css('background', '#AAAAFF')\n",
       "    .css('width', '100 %')\n",
       "    .html('Notebook Output')\n",
       "\n",
       ");\n",
       "container.show()\n"
      ],
      "text/plain": [
       "<IPython.core.display.Javascript at 0x21ac150>"
      ]
     },
     "metadata": {},
     "output_type": "display_data"
    },
    {
     "data": {
      "text/html": [
       "<div style='display: inline-block; width: 30%; vertical-align: top;'><div style='background: #AAFFAA; width: 100%;'>NBConvert Latex Output</div><pre class='prettyprint lang-tex' style='background: #EEFFEE; border: 1px solid #DDEEDD;'><xmp>\\begin{itemize}\n",
       "\\itemsep1pt\\parskip0pt\\parsep0pt\n",
       "\\item\n",
       "  li 1\n",
       "\\item\n",
       "  li 2\n",
       "\n",
       "  \\begin{enumerate}\n",
       "  \\def\\labelenumi{\\arabic{enumi}.}\n",
       "  \\itemsep1pt\\parskip0pt\\parsep0pt\n",
       "  \\item\n",
       "    li 3\n",
       "  \\item\n",
       "    li 4\n",
       "  \\end{enumerate}\n",
       "\\item\n",
       "  li 5\n",
       "\\end{itemize}</xmp></pre></div><div style='display: inline-block; width: 2%;'></div><div style='display: inline-block; width: 30%; vertical-align: top;'><div style='background: #FFAAAA; width: 100%;'>NBViewer Output</div><div style='display: inline-block; width: 100%;'><ul>\n",
       "<li>li 1</li>\n",
       "<li>li 2\n",
       "<ol style=\"list-style-type: decimal\">\n",
       "<li>li 3</li>\n",
       "<li>li 4</li>\n",
       "</ol></li>\n",
       "<li>li 5</li>\n",
       "</ul></div></div>"
      ],
      "text/plain": [
       "<IPython.core.display.HTML at 0x21ac150>"
      ]
     },
     "metadata": {},
     "output_type": "display_data"
    },
    {
     "data": {
      "application/javascript": [
       "\n",
       "    $.getScript(\"https://google-code-prettify.googlecode.com/svn/loader/run_prettify.js\");\n"
      ],
      "text/plain": [
       "<IPython.core.display.Javascript at 0x21ac150>"
      ]
     },
     "metadata": {},
     "output_type": "display_data"
    }
   ],
   "source": [
    "compare_render(r\"\"\"\n",
    "- li 1\n",
    "- li 2\n",
    "    1. li 3\n",
    "    1. li 4\n",
    "- li 5\n",
    "\"\"\")"
   ]
  },
  {
   "cell_type": "markdown",
   "metadata": {},
   "source": [
    "Unicode support"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 7,
   "metadata": {
    "collapsed": false
   },
   "outputs": [
    {
     "data": {
      "application/javascript": [
       "\n",
       "var mdcell = new IPython.MarkdownCell();\n",
       "mdcell.create_element();\n",
       "mdcell.set_text('\\nüberschuß +***^°³³ α β θ\\n');\n",
       "mdcell.render();\n",
       "$(element).append(mdcell.element)\n",
       ".removeClass()\n",
       ".css('left', '66%')\n",
       ".css('position', 'absolute')\n",
       ".css('width', '30%')\n",
       "mdcell.element.prepend(\n",
       "    $('<div />')\n",
       "    .removeClass()\n",
       "    .css('background', '#AAAAFF')\n",
       "    .css('width', '100 %')\n",
       "    .html('Notebook Output')\n",
       "\n",
       ");\n",
       "container.show()\n"
      ],
      "text/plain": [
       "<IPython.core.display.Javascript at 0x22b6950>"
      ]
     },
     "metadata": {},
     "output_type": "display_data"
    },
    {
     "data": {
      "text/html": [
       "<div style='display: inline-block; width: 30%; vertical-align: top;'><div style='background: #AAFFAA; width: 100%;'>NBConvert Latex Output</div><pre class='prettyprint lang-tex' style='background: #EEFFEE; border: 1px solid #DDEEDD;'><xmp>überschuß +\\emph{*}\\^{}°³³ α β θ</xmp></pre></div><div style='display: inline-block; width: 2%;'></div><div style='display: inline-block; width: 30%; vertical-align: top;'><div style='background: #FFAAAA; width: 100%;'>NBViewer Output</div><div style='display: inline-block; width: 100%;'><p>überschuß +<em>*</em>^°³³ α β θ</p></div></div>"
      ],
      "text/plain": [
       "<IPython.core.display.HTML at 0x21ac3d0>"
      ]
     },
     "metadata": {},
     "output_type": "display_data"
    },
    {
     "data": {
      "application/javascript": [
       "\n",
       "    $.getScript(\"https://google-code-prettify.googlecode.com/svn/loader/run_prettify.js\");\n"
      ],
      "text/plain": [
       "<IPython.core.display.Javascript at 0x21ac3d0>"
      ]
     },
     "metadata": {},
     "output_type": "display_data"
    }
   ],
   "source": [
    "compare_render(ur\"\"\"\n",
    "überschuß +***^°³³ α β θ\n",
    "\"\"\")"
   ]
  },
  {
   "cell_type": "markdown",
   "metadata": {},
   "source": [
    "Pandoc may produce invalid latex, e.g \\sout is not allowed in headings"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 8,
   "metadata": {
    "collapsed": false
   },
   "outputs": [
    {
     "data": {
      "application/javascript": [
       "\n",
       "var mdcell = new IPython.MarkdownCell();\n",
       "mdcell.create_element();\n",
       "mdcell.set_text('\\n\\n# Heading 1 ~~strikeout~~\\n');\n",
       "mdcell.render();\n",
       "$(element).append(mdcell.element)\n",
       ".removeClass()\n",
       ".css('left', '66%')\n",
       ".css('position', 'absolute')\n",
       ".css('width', '30%')\n",
       "mdcell.element.prepend(\n",
       "    $('<div />')\n",
       "    .removeClass()\n",
       "    .css('background', '#AAAAFF')\n",
       "    .css('width', '100 %')\n",
       "    .html('Notebook Output')\n",
       "\n",
       ");\n",
       "container.show()\n"
      ],
      "text/plain": [
       "<IPython.core.display.Javascript at 0x21ac590>"
      ]
     },
     "metadata": {},
     "output_type": "display_data"
    },
    {
     "data": {
      "text/html": [
       "<div style='display: inline-block; width: 30%; vertical-align: top;'><div style='background: #AAFFAA; width: 100%;'>NBConvert Latex Output</div><pre class='prettyprint lang-tex' style='background: #EEFFEE; border: 1px solid #DDEEDD;'><xmp>\\section{Heading 1 \\sout{strikeout}}</xmp></pre></div><div style='display: inline-block; width: 2%;'></div><div style='display: inline-block; width: 30%; vertical-align: top;'><div style='background: #FFAAAA; width: 100%;'>NBViewer Output</div><div style='display: inline-block; width: 100%;'><h1 id=\"heading-1-strikeout\">Heading 1 <del>strikeout</del></h1></div></div>"
      ],
      "text/plain": [
       "<IPython.core.display.HTML at 0x21ac590>"
      ]
     },
     "metadata": {},
     "output_type": "display_data"
    },
    {
     "data": {
      "application/javascript": [
       "\n",
       "    $.getScript(\"https://google-code-prettify.googlecode.com/svn/loader/run_prettify.js\");\n"
      ],
      "text/plain": [
       "<IPython.core.display.Javascript at 0x21ac590>"
      ]
     },
     "metadata": {},
     "output_type": "display_data"
    }
   ],
   "source": [
    "compare_render(r\"\"\"\n",
    "\n",
    "# Heading 1 ~~strikeout~~\n",
    "\"\"\")"
   ]
  },
  {
   "cell_type": "markdown",
   "metadata": {},
   "source": [
    "Horizontal lines work just fine"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 9,
   "metadata": {
    "collapsed": false
   },
   "outputs": [
    {
     "data": {
      "application/javascript": [
       "\n",
       "var mdcell = new IPython.MarkdownCell();\n",
       "mdcell.create_element();\n",
       "mdcell.set_text('\\nabove\\n\\n--------\\n\\nbelow\\n');\n",
       "mdcell.render();\n",
       "$(element).append(mdcell.element)\n",
       ".removeClass()\n",
       ".css('left', '66%')\n",
       ".css('position', 'absolute')\n",
       ".css('width', '30%')\n",
       "mdcell.element.prepend(\n",
       "    $('<div />')\n",
       "    .removeClass()\n",
       "    .css('background', '#AAAAFF')\n",
       "    .css('width', '100 %')\n",
       "    .html('Notebook Output')\n",
       "\n",
       ");\n",
       "container.show()\n"
      ],
      "text/plain": [
       "<IPython.core.display.Javascript at 0x21ac150>"
      ]
     },
     "metadata": {},
     "output_type": "display_data"
    },
    {
     "data": {
      "text/html": [
       "<div style='display: inline-block; width: 30%; vertical-align: top;'><div style='background: #AAFFAA; width: 100%;'>NBConvert Latex Output</div><pre class='prettyprint lang-tex' style='background: #EEFFEE; border: 1px solid #DDEEDD;'><xmp>above\n",
       "\n",
       "\\begin{center}\\rule{3in}{0.4pt}\\end{center}\n",
       "\n",
       "below</xmp></pre></div><div style='display: inline-block; width: 2%;'></div><div style='display: inline-block; width: 30%; vertical-align: top;'><div style='background: #FFAAAA; width: 100%;'>NBViewer Output</div><div style='display: inline-block; width: 100%;'><p>above</p>\n",
       "<hr />\n",
       "<p>below</p></div></div>"
      ],
      "text/plain": [
       "<IPython.core.display.HTML at 0x21ac450>"
      ]
     },
     "metadata": {},
     "output_type": "display_data"
    },
    {
     "data": {
      "application/javascript": [
       "\n",
       "    $.getScript(\"https://google-code-prettify.googlecode.com/svn/loader/run_prettify.js\");\n"
      ],
      "text/plain": [
       "<IPython.core.display.Javascript at 0x21ac450>"
      ]
     },
     "metadata": {},
     "output_type": "display_data"
    }
   ],
   "source": [
    "compare_render(r\"\"\"\n",
    "above\n",
    "\n",
    "--------\n",
    "\n",
    "below\n",
    "\"\"\")"
   ]
  },
  {
   "cell_type": "markdown",
   "metadata": {},
   "source": [
    "## Extended markdown of pandoc"
   ]
  },
  {
   "cell_type": "markdown",
   "metadata": {},
   "source": [
    "(maybe we should deactivate this) "
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 10,
   "metadata": {
    "collapsed": false
   },
   "outputs": [
    {
     "data": {
      "application/javascript": [
       "\n",
       "var mdcell = new IPython.MarkdownCell();\n",
       "mdcell.create_element();\n",
       "mdcell.set_text('\\nThis is Markdown ~subscript~ and ^superscript^ text.\\n');\n",
       "mdcell.render();\n",
       "$(element).append(mdcell.element)\n",
       ".removeClass()\n",
       ".css('left', '66%')\n",
       ".css('position', 'absolute')\n",
       ".css('width', '30%')\n",
       "mdcell.element.prepend(\n",
       "    $('<div />')\n",
       "    .removeClass()\n",
       "    .css('background', '#AAAAFF')\n",
       "    .css('width', '100 %')\n",
       "    .html('Notebook Output')\n",
       "\n",
       ");\n",
       "container.show()\n"
      ],
      "text/plain": [
       "<IPython.core.display.Javascript at 0x21ac150>"
      ]
     },
     "metadata": {},
     "output_type": "display_data"
    },
    {
     "data": {
      "text/html": [
       "<div style='display: inline-block; width: 30%; vertical-align: top;'><div style='background: #AAFFAA; width: 100%;'>NBConvert Latex Output</div><pre class='prettyprint lang-tex' style='background: #EEFFEE; border: 1px solid #DDEEDD;'><xmp>This is Markdown \\textsubscript{subscript} and\n",
       "\\textsuperscript{superscript} text.</xmp></pre></div><div style='display: inline-block; width: 2%;'></div><div style='display: inline-block; width: 30%; vertical-align: top;'><div style='background: #FFAAAA; width: 100%;'>NBViewer Output</div><div style='display: inline-block; width: 100%;'><p>This is Markdown <sub>subscript</sub> and <sup>superscript</sup> text.</p></div></div>"
      ],
      "text/plain": [
       "<IPython.core.display.HTML at 0x21ac150>"
      ]
     },
     "metadata": {},
     "output_type": "display_data"
    },
    {
     "data": {
      "application/javascript": [
       "\n",
       "    $.getScript(\"https://google-code-prettify.googlecode.com/svn/loader/run_prettify.js\");\n"
      ],
      "text/plain": [
       "<IPython.core.display.Javascript at 0x21ac150>"
      ]
     },
     "metadata": {},
     "output_type": "display_data"
    }
   ],
   "source": [
    "compare_render(r\"\"\"\n",
    "This is Markdown ~subscript~ and ^superscript^ text.\n",
    "\"\"\")"
   ]
  },
  {
   "cell_type": "markdown",
   "metadata": {},
   "source": [
    "No space before underline behaves inconsistent (Pandoc extension: intraword_underscores - deactivate?)"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 11,
   "metadata": {
    "collapsed": false
   },
   "outputs": [
    {
     "data": {
      "application/javascript": [
       "\n",
       "var mdcell = new IPython.MarkdownCell();\n",
       "mdcell.create_element();\n",
       "mdcell.set_text('\\nThis is Markdown not_italic_.\\n');\n",
       "mdcell.render();\n",
       "$(element).append(mdcell.element)\n",
       ".removeClass()\n",
       ".css('left', '66%')\n",
       ".css('position', 'absolute')\n",
       ".css('width', '30%')\n",
       "mdcell.element.prepend(\n",
       "    $('<div />')\n",
       "    .removeClass()\n",
       "    .css('background', '#AAAAFF')\n",
       "    .css('width', '100 %')\n",
       "    .html('Notebook Output')\n",
       "\n",
       ");\n",
       "container.show()\n"
      ],
      "text/plain": [
       "<IPython.core.display.Javascript at 0x21ac5d0>"
      ]
     },
     "metadata": {},
     "output_type": "display_data"
    },
    {
     "data": {
      "text/html": [
       "<div style='display: inline-block; width: 30%; vertical-align: top;'><div style='background: #AAFFAA; width: 100%;'>NBConvert Latex Output</div><pre class='prettyprint lang-tex' style='background: #EEFFEE; border: 1px solid #DDEEDD;'><xmp>This is Markdown not\\_italic\\_.</xmp></pre></div><div style='display: inline-block; width: 2%;'></div><div style='display: inline-block; width: 30%; vertical-align: top;'><div style='background: #FFAAAA; width: 100%;'>NBViewer Output</div><div style='display: inline-block; width: 100%;'><p>This is Markdown not_italic_.</p></div></div>"
      ],
      "text/plain": [
       "<IPython.core.display.HTML at 0x21ac5d0>"
      ]
     },
     "metadata": {},
     "output_type": "display_data"
    },
    {
     "data": {
      "application/javascript": [
       "\n",
       "    $.getScript(\"https://google-code-prettify.googlecode.com/svn/loader/run_prettify.js\");\n"
      ],
      "text/plain": [
       "<IPython.core.display.Javascript at 0x21ac5d0>"
      ]
     },
     "metadata": {},
     "output_type": "display_data"
    }
   ],
   "source": [
    "compare_render(r\"\"\"\n",
    "This is Markdown not_italic_.\n",
    "\"\"\")"
   ]
  },
  {
   "cell_type": "markdown",
   "metadata": {},
   "source": [
    "Pandoc allows to define tex macros which are respected for all output formats, the notebook not. "
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 12,
   "metadata": {
    "collapsed": false
   },
   "outputs": [
    {
     "data": {
      "application/javascript": [
       "\n",
       "var mdcell = new IPython.MarkdownCell();\n",
       "mdcell.create_element();\n",
       "mdcell.set_text('\\n\\\\newcommand{\\\\tuple}[1]{\\\\langle #1 \\\\rangle}\\n\\n$\\\\tuple{a, b, c}$\\n');\n",
       "mdcell.render();\n",
       "$(element).append(mdcell.element)\n",
       ".removeClass()\n",
       ".css('left', '66%')\n",
       ".css('position', 'absolute')\n",
       ".css('width', '30%')\n",
       "mdcell.element.prepend(\n",
       "    $('<div />')\n",
       "    .removeClass()\n",
       "    .css('background', '#AAAAFF')\n",
       "    .css('width', '100 %')\n",
       "    .html('Notebook Output')\n",
       "\n",
       ");\n",
       "container.show()\n"
      ],
      "text/plain": [
       "<IPython.core.display.Javascript at 0x21ac450>"
      ]
     },
     "metadata": {},
     "output_type": "display_data"
    },
    {
     "data": {
      "text/html": [
       "<div style='display: inline-block; width: 30%; vertical-align: top;'><div style='background: #AAFFAA; width: 100%;'>NBConvert Latex Output</div><pre class='prettyprint lang-tex' style='background: #EEFFEE; border: 1px solid #DDEEDD;'><xmp>\\newcommand{\\tuple}[1]{\\langle #1 \\rangle}\n",
       "\n",
       "$\\tuple{a, b, c}$</xmp></pre></div><div style='display: inline-block; width: 2%;'></div><div style='display: inline-block; width: 30%; vertical-align: top;'><div style='background: #FFAAAA; width: 100%;'>NBViewer Output</div><div style='display: inline-block; width: 100%;'><p><span class=\"math\">\\(\\langle a, b, c \\rangle\\)</span></p></div></div>"
      ],
      "text/plain": [
       "<IPython.core.display.HTML at 0x21ac450>"
      ]
     },
     "metadata": {},
     "output_type": "display_data"
    },
    {
     "data": {
      "application/javascript": [
       "\n",
       "    $.getScript(\"https://google-code-prettify.googlecode.com/svn/loader/run_prettify.js\");\n"
      ],
      "text/plain": [
       "<IPython.core.display.Javascript at 0x21ac450>"
      ]
     },
     "metadata": {},
     "output_type": "display_data"
    }
   ],
   "source": [
    "compare_render(r\"\"\"\n",
    "\\newcommand{\\tuple}[1]{\\langle #1 \\rangle}\n",
    "\n",
    "$\\tuple{a, b, c}$\n",
    "\"\"\")"
   ]
  },
  {
   "cell_type": "markdown",
   "metadata": {},
   "source": [
    "When placing the \\newcommand inside a math environment it works within the notebook and nbviewer, but produces invalid latex (the newcommand is only valid in the same math environment)."
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 13,
   "metadata": {
    "collapsed": false
   },
   "outputs": [
    {
     "data": {
      "application/javascript": [
       "\n",
       "var mdcell = new IPython.MarkdownCell();\n",
       "mdcell.create_element();\n",
       "mdcell.set_text('\\n$\\\\newcommand{\\\\foo}[1]{...:: #1 ::...}$\\n$\\\\foo{bar}$\\n');\n",
       "mdcell.render();\n",
       "$(element).append(mdcell.element)\n",
       ".removeClass()\n",
       ".css('left', '66%')\n",
       ".css('position', 'absolute')\n",
       ".css('width', '30%')\n",
       "mdcell.element.prepend(\n",
       "    $('<div />')\n",
       "    .removeClass()\n",
       "    .css('background', '#AAAAFF')\n",
       "    .css('width', '100 %')\n",
       "    .html('Notebook Output')\n",
       "\n",
       ");\n",
       "container.show()\n"
      ],
      "text/plain": [
       "<IPython.core.display.Javascript at 0x21ac590>"
      ]
     },
     "metadata": {},
     "output_type": "display_data"
    },
    {
     "data": {
      "text/html": [
       "<div style='display: inline-block; width: 30%; vertical-align: top;'><div style='background: #AAFFAA; width: 100%;'>NBConvert Latex Output</div><pre class='prettyprint lang-tex' style='background: #EEFFEE; border: 1px solid #DDEEDD;'><xmp>$\\newcommand{\\foo}[1]{...:: #1 ::...}$ $\\foo{bar}$</xmp></pre></div><div style='display: inline-block; width: 2%;'></div><div style='display: inline-block; width: 30%; vertical-align: top;'><div style='background: #FFAAAA; width: 100%;'>NBViewer Output</div><div style='display: inline-block; width: 100%;'><p><span class=\"math\">\\(\\newcommand{\\foo}[1]{...:: #1 ::...}\\)</span> <span class=\"math\">\\(\\foo{bar}\\)</span></p></div></div>"
      ],
      "text/plain": [
       "<IPython.core.display.HTML at 0x21ac590>"
      ]
     },
     "metadata": {},
     "output_type": "display_data"
    },
    {
     "data": {
      "application/javascript": [
       "\n",
       "    $.getScript(\"https://google-code-prettify.googlecode.com/svn/loader/run_prettify.js\");\n"
      ],
      "text/plain": [
       "<IPython.core.display.Javascript at 0x21ac590>"
      ]
     },
     "metadata": {},
     "output_type": "display_data"
    }
   ],
   "source": [
    "compare_render(r\"\"\"\n",
    "$\\newcommand{\\foo}[1]{...:: #1 ::...}$\n",
    "$\\foo{bar}$\n",
    "\"\"\")"
   ]
  },
  {
   "cell_type": "markdown",
   "metadata": {},
   "source": [
    "## HTML or LaTeX injections"
   ]
  },
  {
   "cell_type": "markdown",
   "metadata": {},
   "source": [
    "Raw HTML gets dropped entirely when converting to $\\LaTeX$."
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 14,
   "metadata": {
    "collapsed": false
   },
   "outputs": [
    {
     "data": {
      "application/javascript": [
       "\n",
       "var mdcell = new IPython.MarkdownCell();\n",
       "mdcell.create_element();\n",
       "mdcell.set_text('\\nThis is HTML <b>bold</b> and <i>italic</i> text.\\n');\n",
       "mdcell.render();\n",
       "$(element).append(mdcell.element)\n",
       ".removeClass()\n",
       ".css('left', '66%')\n",
       ".css('position', 'absolute')\n",
       ".css('width', '30%')\n",
       "mdcell.element.prepend(\n",
       "    $('<div />')\n",
       "    .removeClass()\n",
       "    .css('background', '#AAAAFF')\n",
       "    .css('width', '100 %')\n",
       "    .html('Notebook Output')\n",
       "\n",
       ");\n",
       "container.show()\n"
      ],
      "text/plain": [
       "<IPython.core.display.Javascript at 0x21ac5d0>"
      ]
     },
     "metadata": {},
     "output_type": "display_data"
    },
    {
     "data": {
      "text/html": [
       "<div style='display: inline-block; width: 30%; vertical-align: top;'><div style='background: #AAFFAA; width: 100%;'>NBConvert Latex Output</div><pre class='prettyprint lang-tex' style='background: #EEFFEE; border: 1px solid #DDEEDD;'><xmp>This is HTML bold and italic text.</xmp></pre></div><div style='display: inline-block; width: 2%;'></div><div style='display: inline-block; width: 30%; vertical-align: top;'><div style='background: #FFAAAA; width: 100%;'>NBViewer Output</div><div style='display: inline-block; width: 100%;'><p>This is HTML <b>bold</b> and <i>italic</i> text.</p></div></div>"
      ],
      "text/plain": [
       "<IPython.core.display.HTML at 0x21ac5d0>"
      ]
     },
     "metadata": {},
     "output_type": "display_data"
    },
    {
     "data": {
      "application/javascript": [
       "\n",
       "    $.getScript(\"https://google-code-prettify.googlecode.com/svn/loader/run_prettify.js\");\n"
      ],
      "text/plain": [
       "<IPython.core.display.Javascript at 0x21ac5d0>"
      ]
     },
     "metadata": {},
     "output_type": "display_data"
    }
   ],
   "source": [
    "compare_render(r\"\"\"\n",
    "This is HTML <b>bold</b> and <i>italic</i> text.\n",
    "\"\"\")"
   ]
  },
  {
   "cell_type": "markdown",
   "metadata": {},
   "source": [
    "Same for something like center"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 15,
   "metadata": {
    "collapsed": false
   },
   "outputs": [
    {
     "data": {
      "application/javascript": [
       "\n",
       "var mdcell = new IPython.MarkdownCell();\n",
       "mdcell.create_element();\n",
       "mdcell.set_text('\\n<center>Center aligned</center>\\n');\n",
       "mdcell.render();\n",
       "$(element).append(mdcell.element)\n",
       ".removeClass()\n",
       ".css('left', '66%')\n",
       ".css('position', 'absolute')\n",
       ".css('width', '30%')\n",
       "mdcell.element.prepend(\n",
       "    $('<div />')\n",
       "    .removeClass()\n",
       "    .css('background', '#AAAAFF')\n",
       "    .css('width', '100 %')\n",
       "    .html('Notebook Output')\n",
       "\n",
       ");\n",
       "container.show()\n"
      ],
      "text/plain": [
       "<IPython.core.display.Javascript at 0x21ac210>"
      ]
     },
     "metadata": {},
     "output_type": "display_data"
    },
    {
     "data": {
      "text/html": [
       "<div style='display: inline-block; width: 30%; vertical-align: top;'><div style='background: #AAFFAA; width: 100%;'>NBConvert Latex Output</div><pre class='prettyprint lang-tex' style='background: #EEFFEE; border: 1px solid #DDEEDD;'><xmp>Center aligned</xmp></pre></div><div style='display: inline-block; width: 2%;'></div><div style='display: inline-block; width: 30%; vertical-align: top;'><div style='background: #FFAAAA; width: 100%;'>NBViewer Output</div><div style='display: inline-block; width: 100%;'><center>\n",
       "Center aligned\n",
       "</center></div></div>"
      ],
      "text/plain": [
       "<IPython.core.display.HTML at 0x21ac210>"
      ]
     },
     "metadata": {},
     "output_type": "display_data"
    },
    {
     "data": {
      "application/javascript": [
       "\n",
       "    $.getScript(\"https://google-code-prettify.googlecode.com/svn/loader/run_prettify.js\");\n"
      ],
      "text/plain": [
       "<IPython.core.display.Javascript at 0x21ac210>"
      ]
     },
     "metadata": {},
     "output_type": "display_data"
    }
   ],
   "source": [
    "compare_render(r\"\"\"\n",
    "<center>Center aligned</center>\n",
    "\"\"\")"
   ]
  },
  {
   "cell_type": "markdown",
   "metadata": {},
   "source": [
    "Raw $\\LaTeX$ gets droppen entirely when converted to HTML. (I don't know why the HTML output is cropped here???)"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 16,
   "metadata": {
    "collapsed": false
   },
   "outputs": [
    {
     "data": {
      "application/javascript": [
       "\n",
       "var mdcell = new IPython.MarkdownCell();\n",
       "mdcell.create_element();\n",
       "mdcell.set_text('\\nThis is \\\\LaTeX \\\\bf{bold} and \\\\emph{italic} text.\\n');\n",
       "mdcell.render();\n",
       "$(element).append(mdcell.element)\n",
       ".removeClass()\n",
       ".css('left', '66%')\n",
       ".css('position', 'absolute')\n",
       ".css('width', '30%')\n",
       "mdcell.element.prepend(\n",
       "    $('<div />')\n",
       "    .removeClass()\n",
       "    .css('background', '#AAAAFF')\n",
       "    .css('width', '100 %')\n",
       "    .html('Notebook Output')\n",
       "\n",
       ");\n",
       "container.show()\n"
      ],
      "text/plain": [
       "<IPython.core.display.Javascript at 0x21ac590>"
      ]
     },
     "metadata": {},
     "output_type": "display_data"
    },
    {
     "data": {
      "text/html": [
       "<div style='display: inline-block; width: 30%; vertical-align: top;'><div style='background: #AAFFAA; width: 100%;'>NBConvert Latex Output</div><pre class='prettyprint lang-tex' style='background: #EEFFEE; border: 1px solid #DDEEDD;'><xmp>This is \\LaTeX \\bf{bold} and \\emph{italic} text.</xmp></pre></div><div style='display: inline-block; width: 2%;'></div><div style='display: inline-block; width: 30%; vertical-align: top;'><div style='background: #FFAAAA; width: 100%;'>NBViewer Output</div><div style='display: inline-block; width: 100%;'><p>This is </p></div></div>"
      ],
      "text/plain": [
       "<IPython.core.display.HTML at 0x21ac590>"
      ]
     },
     "metadata": {},
     "output_type": "display_data"
    },
    {
     "data": {
      "application/javascript": [
       "\n",
       "    $.getScript(\"https://google-code-prettify.googlecode.com/svn/loader/run_prettify.js\");\n"
      ],
      "text/plain": [
       "<IPython.core.display.Javascript at 0x21ac590>"
      ]
     },
     "metadata": {},
     "output_type": "display_data"
    }
   ],
   "source": [
    "compare_render(r\"\"\"\n",
    "This is \\LaTeX \\bf{bold} and \\emph{italic} text.\n",
    "\"\"\")"
   ]
  },
  {
   "cell_type": "markdown",
   "metadata": {},
   "source": [
    "A combination of raw $\\LaTeX$ and raw HTML"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 17,
   "metadata": {
    "collapsed": false
   },
   "outputs": [
    {
     "data": {
      "application/javascript": [
       "\n",
       "var mdcell = new IPython.MarkdownCell();\n",
       "mdcell.create_element();\n",
       "mdcell.set_text('\\n**foo** $\\\\left( \\\\sum_{k=1}^n a_k b_k \\\\right)^2 \\\\leq$ <b>b\\\\$ar</b> $$test$$ \\n\\\\cite{}\\n');\n",
       "mdcell.render();\n",
       "$(element).append(mdcell.element)\n",
       ".removeClass()\n",
       ".css('left', '66%')\n",
       ".css('position', 'absolute')\n",
       ".css('width', '30%')\n",
       "mdcell.element.prepend(\n",
       "    $('<div />')\n",
       "    .removeClass()\n",
       "    .css('background', '#AAAAFF')\n",
       "    .css('width', '100 %')\n",
       "    .html('Notebook Output')\n",
       "\n",
       ");\n",
       "container.show()\n"
      ],
      "text/plain": [
       "<IPython.core.display.Javascript at 0x21ac590>"
      ]
     },
     "metadata": {},
     "output_type": "display_data"
    },
    {
     "data": {
      "text/html": [
       "<div style='display: inline-block; width: 30%; vertical-align: top;'><div style='background: #AAFFAA; width: 100%;'>NBConvert Latex Output</div><pre class='prettyprint lang-tex' style='background: #EEFFEE; border: 1px solid #DDEEDD;'><xmp>\\textbf{foo} $\\left( \\sum_{k=1}^n a_k b_k \\right)^2 \\leq$ b\\$ar \\[test\\]\n",
       "\\cite{}</xmp></pre></div><div style='display: inline-block; width: 2%;'></div><div style='display: inline-block; width: 30%; vertical-align: top;'><div style='background: #FFAAAA; width: 100%;'>NBViewer Output</div><div style='display: inline-block; width: 100%;'><p><strong>foo</strong> <span class=\"math\">\\(\\left( \\sum_{k=1}^n a_k b_k \\right)^2 \\leq\\)</span> <b>b$ar</b> <span class=\"math\">\\[test\\]</span> </p></div></div>"
      ],
      "text/plain": [
       "<IPython.core.display.HTML at 0x21ac590>"
      ]
     },
     "metadata": {},
     "output_type": "display_data"
    },
    {
     "data": {
      "application/javascript": [
       "\n",
       "    $.getScript(\"https://google-code-prettify.googlecode.com/svn/loader/run_prettify.js\");\n"
      ],
      "text/plain": [
       "<IPython.core.display.Javascript at 0x21ac590>"
      ]
     },
     "metadata": {},
     "output_type": "display_data"
    }
   ],
   "source": [
    "compare_render(r\"\"\"\n",
    "**foo** $\\left( \\sum_{k=1}^n a_k b_k \\right)^2 \\leq$ <b>b\\$ar</b> $$test$$ \n",
    "\\cite{}\n",
    "\"\"\")"
   ]
  },
  {
   "cell_type": "markdown",
   "metadata": {},
   "source": [
    "## Tables"
   ]
  },
  {
   "cell_type": "markdown",
   "metadata": {},
   "source": [
    "HTML tables render in the notebook, but not in Pandoc."
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 18,
   "metadata": {
    "collapsed": false
   },
   "outputs": [
    {
     "data": {
      "application/javascript": [
       "\n",
       "var mdcell = new IPython.MarkdownCell();\n",
       "mdcell.create_element();\n",
       "mdcell.set_text('\\n<table>\\n    <tr>\\n        <td>a</td>\\n        <td>b</td>\\n    </tr>\\n    <tr>\\n        <td>c</td>\\n        <td>d</td>\\n    </tr>\\n</table>\\n');\n",
       "mdcell.render();\n",
       "$(element).append(mdcell.element)\n",
       ".removeClass()\n",
       ".css('left', '66%')\n",
       ".css('position', 'absolute')\n",
       ".css('width', '30%')\n",
       "mdcell.element.prepend(\n",
       "    $('<div />')\n",
       "    .removeClass()\n",
       "    .css('background', '#AAAAFF')\n",
       "    .css('width', '100 %')\n",
       "    .html('Notebook Output')\n",
       "\n",
       ");\n",
       "container.show()\n"
      ],
      "text/plain": [
       "<IPython.core.display.Javascript at 0x21ac5d0>"
      ]
     },
     "metadata": {},
     "output_type": "display_data"
    },
    {
     "data": {
      "text/html": [
       "<div style='display: inline-block; width: 30%; vertical-align: top;'><div style='background: #AAFFAA; width: 100%;'>NBConvert Latex Output</div><pre class='prettyprint lang-tex' style='background: #EEFFEE; border: 1px solid #DDEEDD;'><xmp>a\n",
       "\n",
       "b\n",
       "\n",
       "c\n",
       "\n",
       "d</xmp></pre></div><div style='display: inline-block; width: 2%;'></div><div style='display: inline-block; width: 30%; vertical-align: top;'><div style='background: #FFAAAA; width: 100%;'>NBViewer Output</div><div style='display: inline-block; width: 100%;'><table>\n",
       "    <tr>\n",
       "        <td>\n",
       "a\n",
       "</td>\n",
       "        <td>\n",
       "b\n",
       "</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "        <td>\n",
       "c\n",
       "</td>\n",
       "        <td>\n",
       "d\n",
       "</td>\n",
       "    </tr>\n",
       "</table></div></div>"
      ],
      "text/plain": [
       "<IPython.core.display.HTML at 0x21ac5d0>"
      ]
     },
     "metadata": {},
     "output_type": "display_data"
    },
    {
     "data": {
      "application/javascript": [
       "\n",
       "    $.getScript(\"https://google-code-prettify.googlecode.com/svn/loader/run_prettify.js\");\n"
      ],
      "text/plain": [
       "<IPython.core.display.Javascript at 0x21ac5d0>"
      ]
     },
     "metadata": {},
     "output_type": "display_data"
    }
   ],
   "source": [
    "compare_render(r\"\"\"\n",
    "<table>\n",
    "    <tr>\n",
    "        <td>a</td>\n",
    "        <td>b</td>\n",
    "    </tr>\n",
    "    <tr>\n",
    "        <td>c</td>\n",
    "        <td>d</td>\n",
    "    </tr>\n",
    "</table>\n",
    "\"\"\")"
   ]
  },
  {
   "cell_type": "markdown",
   "metadata": {},
   "source": [
    "Instead, Pandoc supports simple ascii tables.  Unfortunately marked.js doesn't support this, and therefore it is not supported in the notebook."
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 19,
   "metadata": {
    "collapsed": false
   },
   "outputs": [
    {
     "data": {
      "application/javascript": [
       "\n",
       "var mdcell = new IPython.MarkdownCell();\n",
       "mdcell.create_element();\n",
       "mdcell.set_text('\\n+---+---+\\n| a | b |\\n+---+---+\\n| c | d |\\n+---+---+\\n');\n",
       "mdcell.render();\n",
       "$(element).append(mdcell.element)\n",
       ".removeClass()\n",
       ".css('left', '66%')\n",
       ".css('position', 'absolute')\n",
       ".css('width', '30%')\n",
       "mdcell.element.prepend(\n",
       "    $('<div />')\n",
       "    .removeClass()\n",
       "    .css('background', '#AAAAFF')\n",
       "    .css('width', '100 %')\n",
       "    .html('Notebook Output')\n",
       "\n",
       ");\n",
       "container.show()\n"
      ],
      "text/plain": [
       "<IPython.core.display.Javascript at 0x21ac210>"
      ]
     },
     "metadata": {},
     "output_type": "display_data"
    },
    {
     "data": {
      "text/html": [
       "<div style='display: inline-block; width: 30%; vertical-align: top;'><div style='background: #AAFFAA; width: 100%;'>NBConvert Latex Output</div><pre class='prettyprint lang-tex' style='background: #EEFFEE; border: 1px solid #DDEEDD;'><xmp>\\begin{longtable}[c]{@{}ll@{}}\n",
       "\\hline\\noalign{\\medskip}\n",
       "\\begin{minipage}[t]{0.06\\columnwidth}\\raggedright\n",
       "a\n",
       "\\end{minipage} & \\begin{minipage}[t]{0.06\\columnwidth}\\raggedright\n",
       "b\n",
       "\\end{minipage}\n",
       "\\\\\\noalign{\\medskip}\n",
       "\\begin{minipage}[t]{0.06\\columnwidth}\\raggedright\n",
       "c\n",
       "\\end{minipage} & \\begin{minipage}[t]{0.06\\columnwidth}\\raggedright\n",
       "d\n",
       "\\end{minipage}\n",
       "\\\\\\noalign{\\medskip}\n",
       "\\hline\n",
       "\\end{longtable}</xmp></pre></div><div style='display: inline-block; width: 2%;'></div><div style='display: inline-block; width: 30%; vertical-align: top;'><div style='background: #FFAAAA; width: 100%;'>NBViewer Output</div><div style='display: inline-block; width: 100%;'><table>\n",
       "<col width=\"5%\" />\n",
       "<col width=\"5%\" />\n",
       "<tbody>\n",
       "<tr class=\"odd\">\n",
       "<td align=\"left\"><p>a</p></td>\n",
       "<td align=\"left\"><p>b</p></td>\n",
       "</tr>\n",
       "<tr class=\"even\">\n",
       "<td align=\"left\"><p>c</p></td>\n",
       "<td align=\"left\"><p>d</p></td>\n",
       "</tr>\n",
       "</tbody>\n",
       "</table></div></div>"
      ],
      "text/plain": [
       "<IPython.core.display.HTML at 0x21ac210>"
      ]
     },
     "metadata": {},
     "output_type": "display_data"
    },
    {
     "data": {
      "application/javascript": [
       "\n",
       "    $.getScript(\"https://google-code-prettify.googlecode.com/svn/loader/run_prettify.js\");\n"
      ],
      "text/plain": [
       "<IPython.core.display.Javascript at 0x21ac210>"
      ]
     },
     "metadata": {},
     "output_type": "display_data"
    }
   ],
   "source": [
    "compare_render(r\"\"\"\n",
    "+---+---+\n",
    "| a | b |\n",
    "+---+---+\n",
    "| c | d |\n",
    "+---+---+\n",
    "\"\"\")"
   ]
  },
  {
   "cell_type": "markdown",
   "metadata": {},
   "source": [
    "An alternative to basic ascii tables is pipe tables.  Pipe tables can be recognized by Pandoc and are supported by marked, hence, this is the **best way to add tables**."
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 20,
   "metadata": {
    "collapsed": false
   },
   "outputs": [
    {
     "data": {
      "application/javascript": [
       "\n",
       "var mdcell = new IPython.MarkdownCell();\n",
       "mdcell.create_element();\n",
       "mdcell.set_text('\\n|Left |Center |Right|\\n|:----|:-----:|----:|\\n|Text1|Text2  |Text3|\\n');\n",
       "mdcell.render();\n",
       "$(element).append(mdcell.element)\n",
       ".removeClass()\n",
       ".css('left', '66%')\n",
       ".css('position', 'absolute')\n",
       ".css('width', '30%')\n",
       "mdcell.element.prepend(\n",
       "    $('<div />')\n",
       "    .removeClass()\n",
       "    .css('background', '#AAAAFF')\n",
       "    .css('width', '100 %')\n",
       "    .html('Notebook Output')\n",
       "\n",
       ");\n",
       "container.show()\n"
      ],
      "text/plain": [
       "<IPython.core.display.Javascript at 0x21ac150>"
      ]
     },
     "metadata": {},
     "output_type": "display_data"
    },
    {
     "data": {
      "text/html": [
       "<div style='display: inline-block; width: 30%; vertical-align: top;'><div style='background: #AAFFAA; width: 100%;'>NBConvert Latex Output</div><pre class='prettyprint lang-tex' style='background: #EEFFEE; border: 1px solid #DDEEDD;'><xmp>\\begin{longtable}[c]{@{}lcr@{}}\n",
       "\\hline\\noalign{\\medskip}\n",
       "Left & Center & Right\n",
       "\\\\\\noalign{\\medskip}\n",
       "\\hline\\noalign{\\medskip}\n",
       "Text1 & Text2 & Text3\n",
       "\\\\\\noalign{\\medskip}\n",
       "\\hline\n",
       "\\end{longtable}</xmp></pre></div><div style='display: inline-block; width: 2%;'></div><div style='display: inline-block; width: 30%; vertical-align: top;'><div style='background: #FFAAAA; width: 100%;'>NBViewer Output</div><div style='display: inline-block; width: 100%;'><table>\n",
       "<thead>\n",
       "<tr class=\"header\">\n",
       "<th align=\"left\">Left</th>\n",
       "<th align=\"center\">Center</th>\n",
       "<th align=\"right\">Right</th>\n",
       "</tr>\n",
       "</thead>\n",
       "<tbody>\n",
       "<tr class=\"odd\">\n",
       "<td align=\"left\">Text1</td>\n",
       "<td align=\"center\">Text2</td>\n",
       "<td align=\"right\">Text3</td>\n",
       "</tr>\n",
       "</tbody>\n",
       "</table></div></div>"
      ],
      "text/plain": [
       "<IPython.core.display.HTML at 0x21ac150>"
      ]
     },
     "metadata": {},
     "output_type": "display_data"
    },
    {
     "data": {
      "application/javascript": [
       "\n",
       "    $.getScript(\"https://google-code-prettify.googlecode.com/svn/loader/run_prettify.js\");\n"
      ],
      "text/plain": [
       "<IPython.core.display.Javascript at 0x21ac150>"
      ]
     },
     "metadata": {},
     "output_type": "display_data"
    }
   ],
   "source": [
    "compare_render(r\"\"\"\n",
    "|Left |Center |Right|\n",
    "|:----|:-----:|----:|\n",
    "|Text1|Text2  |Text3|\n",
    "\"\"\")"
   ]
  },
  {
   "cell_type": "markdown",
   "metadata": {},
   "source": [
    "Pandoc recognizes cell alignment in simple tables.  Since marked.js doesn't recognize ascii tables, it can't render this table."
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 21,
   "metadata": {
    "collapsed": false
   },
   "outputs": [
    {
     "data": {
      "application/javascript": [
       "\n",
       "var mdcell = new IPython.MarkdownCell();\n",
       "mdcell.create_element();\n",
       "mdcell.set_text('\\nRight Aligned Center Aligned Left Aligned\\n------------- -------------- ------------\\n          Why      does      this\\n     actually      work?     Who\\n        knows       ...\\n');\n",
       "mdcell.render();\n",
       "$(element).append(mdcell.element)\n",
       ".removeClass()\n",
       ".css('left', '66%')\n",
       ".css('position', 'absolute')\n",
       ".css('width', '30%')\n",
       "mdcell.element.prepend(\n",
       "    $('<div />')\n",
       "    .removeClass()\n",
       "    .css('background', '#AAAAFF')\n",
       "    .css('width', '100 %')\n",
       "    .html('Notebook Output')\n",
       "\n",
       ");\n",
       "container.show()\n"
      ],
      "text/plain": [
       "<IPython.core.display.Javascript at 0x21ac450>"
      ]
     },
     "metadata": {},
     "output_type": "display_data"
    },
    {
     "data": {
      "text/html": [
       "<div style='display: inline-block; width: 30%; vertical-align: top;'><div style='background: #AAFFAA; width: 100%;'>NBConvert Latex Output</div><pre class='prettyprint lang-tex' style='background: #EEFFEE; border: 1px solid #DDEEDD;'><xmp>\\begin{longtable}[c]{@{}lll@{}}\n",
       "\\hline\\noalign{\\medskip}\n",
       "Right Aligned & Center Aligned & Left Aligned\n",
       "\\\\\\noalign{\\medskip}\n",
       "\\hline\\noalign{\\medskip}\n",
       "Why & does & this\n",
       "\\\\\\noalign{\\medskip}\n",
       "actually & work? & Who\n",
       "\\\\\\noalign{\\medskip}\n",
       "knows & \\ldots{} &\n",
       "\\\\\\noalign{\\medskip}\n",
       "\\hline\n",
       "\\end{longtable}</xmp></pre></div><div style='display: inline-block; width: 2%;'></div><div style='display: inline-block; width: 30%; vertical-align: top;'><div style='background: #FFAAAA; width: 100%;'>NBViewer Output</div><div style='display: inline-block; width: 100%;'><table>\n",
       "<thead>\n",
       "<tr class=\"header\">\n",
       "<th align=\"left\">Right Aligned</th>\n",
       "<th align=\"left\">Center Aligned</th>\n",
       "<th align=\"left\">Left Aligned</th>\n",
       "</tr>\n",
       "</thead>\n",
       "<tbody>\n",
       "<tr class=\"odd\">\n",
       "<td align=\"left\">Why</td>\n",
       "<td align=\"left\">does</td>\n",
       "<td align=\"left\">this</td>\n",
       "</tr>\n",
       "<tr class=\"even\">\n",
       "<td align=\"left\">actually</td>\n",
       "<td align=\"left\">work?</td>\n",
       "<td align=\"left\">Who</td>\n",
       "</tr>\n",
       "<tr class=\"odd\">\n",
       "<td align=\"left\">knows</td>\n",
       "<td align=\"left\">...</td>\n",
       "<td align=\"left\"></td>\n",
       "</tr>\n",
       "</tbody>\n",
       "</table></div></div>"
      ],
      "text/plain": [
       "<IPython.core.display.HTML at 0x21ac450>"
      ]
     },
     "metadata": {},
     "output_type": "display_data"
    },
    {
     "data": {
      "application/javascript": [
       "\n",
       "    $.getScript(\"https://google-code-prettify.googlecode.com/svn/loader/run_prettify.js\");\n"
      ],
      "text/plain": [
       "<IPython.core.display.Javascript at 0x21ac450>"
      ]
     },
     "metadata": {},
     "output_type": "display_data"
    },
    {
     "name": "stdout",
     "output_type": "stream",
     "text": [
      "\n",
      "\n",
      "\n",
      "\n",
      "\n",
      "\n"
     ]
    }
   ],
   "source": [
    "compare_render(r\"\"\"\n",
    "Right Aligned Center Aligned Left Aligned\n",
    "------------- -------------- ------------\n",
    "          Why      does      this\n",
    "     actually      work?     Who\n",
    "        knows       ...\n",
    "\"\"\")\n",
    "\n",
    "print(\"\\n\"*5)"
   ]
  },
  {
   "cell_type": "markdown",
   "metadata": {},
   "source": [
    "## Images"
   ]
  },
  {
   "cell_type": "markdown",
   "metadata": {},
   "source": [
    "Markdown images work on both. However, remote images are not allowed in $\\LaTeX$. Maybe add a preprocessor to download these.\n",
    "The alternate text is displayed in nbviewer next to the image."
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 22,
   "metadata": {
    "collapsed": false
   },
   "outputs": [
    {
     "data": {
      "application/javascript": [
       "\n",
       "var mdcell = new IPython.MarkdownCell();\n",
       "mdcell.create_element();\n",
       "mdcell.set_text('\\n![Alternate Text](http://ipython.org/_static/IPy_header.png)\\n');\n",
       "mdcell.render();\n",
       "$(element).append(mdcell.element)\n",
       ".removeClass()\n",
       ".css('left', '66%')\n",
       ".css('position', 'absolute')\n",
       ".css('width', '30%')\n",
       "mdcell.element.prepend(\n",
       "    $('<div />')\n",
       "    .removeClass()\n",
       "    .css('background', '#AAAAFF')\n",
       "    .css('width', '100 %')\n",
       "    .html('Notebook Output')\n",
       "\n",
       ");\n",
       "container.show()\n"
      ],
      "text/plain": [
       "<IPython.core.display.Javascript at 0x22b6690>"
      ]
     },
     "metadata": {},
     "output_type": "display_data"
    },
    {
     "data": {
      "text/html": [
       "<div style='display: inline-block; width: 30%; vertical-align: top;'><div style='background: #AAFFAA; width: 100%;'>NBConvert Latex Output</div><pre class='prettyprint lang-tex' style='background: #EEFFEE; border: 1px solid #DDEEDD;'><xmp>\\begin{figure}[htbp]\n",
       "\\centering\n",
       "\\includegraphics{http://ipython.org/_static/IPy_header.png}\n",
       "\\caption{Alternate Text}\n",
       "\\end{figure}</xmp></pre></div><div style='display: inline-block; width: 2%;'></div><div style='display: inline-block; width: 30%; vertical-align: top;'><div style='background: #FFAAAA; width: 100%;'>NBViewer Output</div><div style='display: inline-block; width: 100%;'><div class=\"figure\">\n",
       "<img src=\"http://ipython.org/_static/IPy_header.png\" alt=\"Alternate Text\" /><p class=\"caption\">Alternate Text</p>\n",
       "</div></div></div>"
      ],
      "text/plain": [
       "<IPython.core.display.HTML at 0x21ac450>"
      ]
     },
     "metadata": {},
     "output_type": "display_data"
    },
    {
     "data": {
      "application/javascript": [
       "\n",
       "    $.getScript(\"https://google-code-prettify.googlecode.com/svn/loader/run_prettify.js\");\n"
      ],
      "text/plain": [
       "<IPython.core.display.Javascript at 0x21ac450>"
      ]
     },
     "metadata": {},
     "output_type": "display_data"
    }
   ],
   "source": [
    "compare_render(r\"\"\"\n",
    "![Alternate Text](http://ipython.org/_static/IPy_header.png)\n",
    "\"\"\")"
   ]
  },
  {
   "cell_type": "markdown",
   "metadata": {},
   "source": [
    "HTML Images only work in the notebook."
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 23,
   "metadata": {
    "collapsed": false
   },
   "outputs": [
    {
     "data": {
      "application/javascript": [
       "\n",
       "var mdcell = new IPython.MarkdownCell();\n",
       "mdcell.create_element();\n",
       "mdcell.set_text('\\n<img src=\"http://ipython.org/_static/IPy_header.png\">\\n');\n",
       "mdcell.render();\n",
       "$(element).append(mdcell.element)\n",
       ".removeClass()\n",
       ".css('left', '66%')\n",
       ".css('position', 'absolute')\n",
       ".css('width', '30%')\n",
       "mdcell.element.prepend(\n",
       "    $('<div />')\n",
       "    .removeClass()\n",
       "    .css('background', '#AAAAFF')\n",
       "    .css('width', '100 %')\n",
       "    .html('Notebook Output')\n",
       "\n",
       ");\n",
       "container.show()\n"
      ],
      "text/plain": [
       "<IPython.core.display.Javascript at 0x22b65d0>"
      ]
     },
     "metadata": {},
     "output_type": "display_data"
    },
    {
     "data": {
      "text/html": [
       "<div style='display: inline-block; width: 30%; vertical-align: top;'><div style='background: #AAFFAA; width: 100%;'>NBConvert Latex Output</div><pre class='prettyprint lang-tex' style='background: #EEFFEE; border: 1px solid #DDEEDD;'><xmp></xmp></pre></div><div style='display: inline-block; width: 2%;'></div><div style='display: inline-block; width: 30%; vertical-align: top;'><div style='background: #FFAAAA; width: 100%;'>NBViewer Output</div><div style='display: inline-block; width: 100%;'><p><img src=\"http://ipython.org/_static/IPy_header.png\"></p></div></div>"
      ],
      "text/plain": [
       "<IPython.core.display.HTML at 0x21ac450>"
      ]
     },
     "metadata": {},
     "output_type": "display_data"
    },
    {
     "data": {
      "application/javascript": [
       "\n",
       "    $.getScript(\"https://google-code-prettify.googlecode.com/svn/loader/run_prettify.js\");\n"
      ],
      "text/plain": [
       "<IPython.core.display.Javascript at 0x21ac450>"
      ]
     },
     "metadata": {},
     "output_type": "display_data"
    }
   ],
   "source": [
    "compare_render(r\"\"\"\n",
    "<img src=\"http://ipython.org/_static/IPy_header.png\">\n",
    "\"\"\")"
   ]
  },
  {
   "cell_type": "markdown",
   "metadata": {},
   "source": [
    "## Math"
   ]
  },
  {
   "cell_type": "markdown",
   "metadata": {},
   "source": [
    "Simple inline and displaystyle maths work fine"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 24,
   "metadata": {
    "collapsed": false
   },
   "outputs": [
    {
     "data": {
      "application/javascript": [
       "\n",
       "var mdcell = new IPython.MarkdownCell();\n",
       "mdcell.create_element();\n",
       "mdcell.set_text('\\nMy equation:\\n$$ 5/x=2y $$\\n\\nIt is inline $ 5/x=2y $ here.\\n');\n",
       "mdcell.render();\n",
       "$(element).append(mdcell.element)\n",
       ".removeClass()\n",
       ".css('left', '66%')\n",
       ".css('position', 'absolute')\n",
       ".css('width', '30%')\n",
       "mdcell.element.prepend(\n",
       "    $('<div />')\n",
       "    .removeClass()\n",
       "    .css('background', '#AAAAFF')\n",
       "    .css('width', '100 %')\n",
       "    .html('Notebook Output')\n",
       "\n",
       ");\n",
       "container.show()\n"
      ],
      "text/plain": [
       "<IPython.core.display.Javascript at 0x22b6950>"
      ]
     },
     "metadata": {},
     "output_type": "display_data"
    },
    {
     "data": {
      "text/html": [
       "<div style='display: inline-block; width: 30%; vertical-align: top;'><div style='background: #AAFFAA; width: 100%;'>NBConvert Latex Output</div><pre class='prettyprint lang-tex' style='background: #EEFFEE; border: 1px solid #DDEEDD;'><xmp>My equation: \\[ 5/x=2y \\]\n",
       "\n",
       "It is inline \\$ 5/x=2y \\$ here.</xmp></pre></div><div style='display: inline-block; width: 2%;'></div><div style='display: inline-block; width: 30%; vertical-align: top;'><div style='background: #FFAAAA; width: 100%;'>NBViewer Output</div><div style='display: inline-block; width: 100%;'><p>My equation: <span class=\"math\">\\[ 5/x=2y \\]</span></p>\n",
       "<p>It is inline $ 5/x=2y $ here.</p></div></div>"
      ],
      "text/plain": [
       "<IPython.core.display.HTML at 0x21ac450>"
      ]
     },
     "metadata": {},
     "output_type": "display_data"
    },
    {
     "data": {
      "application/javascript": [
       "\n",
       "    $.getScript(\"https://google-code-prettify.googlecode.com/svn/loader/run_prettify.js\");\n"
      ],
      "text/plain": [
       "<IPython.core.display.Javascript at 0x21ac450>"
      ]
     },
     "metadata": {},
     "output_type": "display_data"
    }
   ],
   "source": [
    "compare_render(r\"\"\"\n",
    "My equation:\n",
    "$$ 5/x=2y $$\n",
    "\n",
    "It is inline $ 5/x=2y $ here.\n",
    "\"\"\")"
   ]
  },
  {
   "cell_type": "markdown",
   "metadata": {},
   "source": [
    "If the first \\$ is on a new line, the equation is not captured by md2tex, if both \\$s are on a new line md2html fails (Note the raw latex is dropped) but the notebook renders it correctly."
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 25,
   "metadata": {
    "collapsed": false
   },
   "outputs": [
    {
     "data": {
      "application/javascript": [
       "\n",
       "var mdcell = new IPython.MarkdownCell();\n",
       "mdcell.create_element();\n",
       "mdcell.set_text('\\n$5 \\\\cdot x=2$\\n\\n$\\n5 \\\\cdot x=2$\\n\\n$\\n5 \\\\cdot x=2\\n$\\n');\n",
       "mdcell.render();\n",
       "$(element).append(mdcell.element)\n",
       ".removeClass()\n",
       ".css('left', '66%')\n",
       ".css('position', 'absolute')\n",
       ".css('width', '30%')\n",
       "mdcell.element.prepend(\n",
       "    $('<div />')\n",
       "    .removeClass()\n",
       "    .css('background', '#AAAAFF')\n",
       "    .css('width', '100 %')\n",
       "    .html('Notebook Output')\n",
       "\n",
       ");\n",
       "container.show()\n"
      ],
      "text/plain": [
       "<IPython.core.display.Javascript at 0x22b66d0>"
      ]
     },
     "metadata": {},
     "output_type": "display_data"
    },
    {
     "data": {
      "text/html": [
       "<div style='display: inline-block; width: 30%; vertical-align: top;'><div style='background: #AAFFAA; width: 100%;'>NBConvert Latex Output</div><pre class='prettyprint lang-tex' style='background: #EEFFEE; border: 1px solid #DDEEDD;'><xmp>$5 \\cdot x=2$\n",
       "\n",
       "\\$ 5 \\cdot x=2\\$\n",
       "\n",
       "\\$ 5 \\cdot x=2 \\$</xmp></pre></div><div style='display: inline-block; width: 2%;'></div><div style='display: inline-block; width: 30%; vertical-align: top;'><div style='background: #FFAAAA; width: 100%;'>NBViewer Output</div><div style='display: inline-block; width: 100%;'><p><span class=\"math\">\\(5 \\cdot x=2\\)</span></p>\n",
       "<p>$ 5 x=2$</p>\n",
       "<p>$ 5 x=2 $</p></div></div>"
      ],
      "text/plain": [
       "<IPython.core.display.HTML at 0x21ac450>"
      ]
     },
     "metadata": {},
     "output_type": "display_data"
    },
    {
     "data": {
      "application/javascript": [
       "\n",
       "    $.getScript(\"https://google-code-prettify.googlecode.com/svn/loader/run_prettify.js\");\n"
      ],
      "text/plain": [
       "<IPython.core.display.Javascript at 0x21ac450>"
      ]
     },
     "metadata": {},
     "output_type": "display_data"
    }
   ],
   "source": [
    "compare_render(r\"\"\"\n",
    "$5 \\cdot x=2$\n",
    "\n",
    "$\n",
    "5 \\cdot x=2$\n",
    "\n",
    "$\n",
    "5 \\cdot x=2\n",
    "$\n",
    "\"\"\")"
   ]
  },
  {
   "cell_type": "markdown",
   "metadata": {},
   "source": [
    "MathJax permits some $\\LaTeX$ math constructs without \\$s, of course these raw $\\LaTeX$ is stripped when converting to html.\n",
    "Moreove, the & are escaped by the lxml parsing [#4251](https://github.com/ipython/ipython/issues/4251)."
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 26,
   "metadata": {
    "collapsed": false
   },
   "outputs": [
    {
     "data": {
      "application/javascript": [
       "\n",
       "var mdcell = new IPython.MarkdownCell();\n",
       "mdcell.create_element();\n",
       "mdcell.set_text('\\n\\\\begin{align}\\na & b\\\\\\\\\\nd & c\\n\\\\end{align}\\n\\n\\\\begin{eqnarray}\\na & b \\\\\\\\\\nc & d\\n\\\\end{eqnarray}\\n');\n",
       "mdcell.render();\n",
       "$(element).append(mdcell.element)\n",
       ".removeClass()\n",
       ".css('left', '66%')\n",
       ".css('position', 'absolute')\n",
       ".css('width', '30%')\n",
       "mdcell.element.prepend(\n",
       "    $('<div />')\n",
       "    .removeClass()\n",
       "    .css('background', '#AAAAFF')\n",
       "    .css('width', '100 %')\n",
       "    .html('Notebook Output')\n",
       "\n",
       ");\n",
       "container.show()\n"
      ],
      "text/plain": [
       "<IPython.core.display.Javascript at 0x22b6690>"
      ]
     },
     "metadata": {},
     "output_type": "display_data"
    },
    {
     "data": {
      "text/html": [
       "<div style='display: inline-block; width: 30%; vertical-align: top;'><div style='background: #AAFFAA; width: 100%;'>NBConvert Latex Output</div><pre class='prettyprint lang-tex' style='background: #EEFFEE; border: 1px solid #DDEEDD;'><xmp>\\begin{align}\n",
       "a &amp; b\\\\\n",
       "d &amp; c\n",
       "\\end{align}\n",
       "\n",
       "\\begin{eqnarray}\n",
       "a &amp; b \\\\\n",
       "c &amp; d\n",
       "\\end{eqnarray}</xmp></pre></div><div style='display: inline-block; width: 2%;'></div><div style='display: inline-block; width: 30%; vertical-align: top;'><div style='background: #FFAAAA; width: 100%;'>NBViewer Output</div><div style='display: inline-block; width: 100%;'></div></div>"
      ],
      "text/plain": [
       "<IPython.core.display.HTML at 0x21ac450>"
      ]
     },
     "metadata": {},
     "output_type": "display_data"
    },
    {
     "data": {
      "application/javascript": [
       "\n",
       "    $.getScript(\"https://google-code-prettify.googlecode.com/svn/loader/run_prettify.js\");\n"
      ],
      "text/plain": [
       "<IPython.core.display.Javascript at 0x21ac450>"
      ]
     },
     "metadata": {},
     "output_type": "display_data"
    }
   ],
   "source": [
    "compare_render(r\"\"\"\n",
    "\\begin{align}\n",
    "a & b\\\\\n",
    "d & c\n",
    "\\end{align}\n",
    "\n",
    "\\begin{eqnarray}\n",
    "a & b \\\\\n",
    "c & d\n",
    "\\end{eqnarray}\n",
    "\"\"\")"
   ]
  },
  {
   "cell_type": "markdown",
   "metadata": {},
   "source": [
    "There is another lxml issue, [#4283](https://github.com/ipython/ipython/issues/4283)"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 27,
   "metadata": {
    "collapsed": false
   },
   "outputs": [
    {
     "data": {
      "application/javascript": [
       "\n",
       "var mdcell = new IPython.MarkdownCell();\n",
       "mdcell.create_element();\n",
       "mdcell.set_text('\\n1<2 is true, but 3>4 is false.\\n\\n$1<2$ is true, but $3>4$ is false.\\n\\n1<2 it is even worse if it is alone in a line.\\n');\n",
       "mdcell.render();\n",
       "$(element).append(mdcell.element)\n",
       ".removeClass()\n",
       ".css('left', '66%')\n",
       ".css('position', 'absolute')\n",
       ".css('width', '30%')\n",
       "mdcell.element.prepend(\n",
       "    $('<div />')\n",
       "    .removeClass()\n",
       "    .css('background', '#AAAAFF')\n",
       "    .css('width', '100 %')\n",
       "    .html('Notebook Output')\n",
       "\n",
       ");\n",
       "container.show()\n"
      ],
      "text/plain": [
       "<IPython.core.display.Javascript at 0x22b6950>"
      ]
     },
     "metadata": {},
     "output_type": "display_data"
    },
    {
     "data": {
      "text/html": [
       "<div style='display: inline-block; width: 30%; vertical-align: top;'><div style='background: #AAFFAA; width: 100%;'>NBConvert Latex Output</div><pre class='prettyprint lang-tex' style='background: #EEFFEE; border: 1px solid #DDEEDD;'><xmp>14 is false.\n",
       "\n",
       "$14$ is false.\n",
       "\n",
       "1</xmp></pre></div><div style='display: inline-block; width: 2%;'></div><div style='display: inline-block; width: 30%; vertical-align: top;'><div style='background: #FFAAAA; width: 100%;'>NBViewer Output</div><div style='display: inline-block; width: 100%;'><p>1&lt;2 is true, but 3&gt;4 is false.</p>\n",
       "<p><span class=\"math\">\\(1&lt;2\\)</span> is true, but <span class=\"math\">\\(3&gt;4\\)</span> is false.</p>\n",
       "<p>1&lt;2 it is even worse if it is alone in a line.</p></div></div>"
      ],
      "text/plain": [
       "<IPython.core.display.HTML at 0x21ac450>"
      ]
     },
     "metadata": {},
     "output_type": "display_data"
    },
    {
     "data": {
      "application/javascript": [
       "\n",
       "    $.getScript(\"https://google-code-prettify.googlecode.com/svn/loader/run_prettify.js\");\n"
      ],
      "text/plain": [
       "<IPython.core.display.Javascript at 0x21ac450>"
      ]
     },
     "metadata": {},
     "output_type": "display_data"
    }
   ],
   "source": [
    "compare_render(r\"\"\"\n",
    "1<2 is true, but 3>4 is false.\n",
    "\n",
    "$1<2$ is true, but $3>4$ is false.\n",
    "\n",
    "1<2 it is even worse if it is alone in a line.\n",
    "\"\"\")"
   ]
  },
  {
   "cell_type": "markdown",
   "metadata": {},
   "source": [
    "## Listings, and Code blocks"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 28,
   "metadata": {
    "collapsed": false
   },
   "outputs": [
    {
     "data": {
      "application/javascript": [
       "\n",
       "var mdcell = new IPython.MarkdownCell();\n",
       "mdcell.create_element();\n",
       "mdcell.set_text('\\nsome source code\\n\\n```\\na = \"test\"\\nprint(a)\\n```\\n');\n",
       "mdcell.render();\n",
       "$(element).append(mdcell.element)\n",
       ".removeClass()\n",
       ".css('left', '66%')\n",
       ".css('position', 'absolute')\n",
       ".css('width', '30%')\n",
       "mdcell.element.prepend(\n",
       "    $('<div />')\n",
       "    .removeClass()\n",
       "    .css('background', '#AAAAFF')\n",
       "    .css('width', '100 %')\n",
       "    .html('Notebook Output')\n",
       "\n",
       ");\n",
       "container.show()\n"
      ],
      "text/plain": [
       "<IPython.core.display.Javascript at 0x22b68d0>"
      ]
     },
     "metadata": {},
     "output_type": "display_data"
    },
    {
     "data": {
      "text/html": [
       "<div style='display: inline-block; width: 30%; vertical-align: top;'><div style='background: #AAFFAA; width: 100%;'>NBConvert Latex Output</div><pre class='prettyprint lang-tex' style='background: #EEFFEE; border: 1px solid #DDEEDD;'><xmp>some source code\n",
       "\n",
       "\\begin{verbatim}\n",
       "a = \"test\"\n",
       "print(a)\n",
       "\\end{verbatim}</xmp></pre></div><div style='display: inline-block; width: 2%;'></div><div style='display: inline-block; width: 30%; vertical-align: top;'><div style='background: #FFAAAA; width: 100%;'>NBViewer Output</div><div style='display: inline-block; width: 100%;'><p>some source code</p>\n",
       "<pre><code>a = &quot;test&quot;\n",
       "print(a)</code></pre></div></div>"
      ],
      "text/plain": [
       "<IPython.core.display.HTML at 0x21ac450>"
      ]
     },
     "metadata": {},
     "output_type": "display_data"
    },
    {
     "data": {
      "application/javascript": [
       "\n",
       "    $.getScript(\"https://google-code-prettify.googlecode.com/svn/loader/run_prettify.js\");\n"
      ],
      "text/plain": [
       "<IPython.core.display.Javascript at 0x21ac450>"
      ]
     },
     "metadata": {},
     "output_type": "display_data"
    }
   ],
   "source": [
    "compare_render(r\"\"\"\n",
    "some source code\n",
    "\n",
    "```\n",
    "a = \"test\"\n",
    "print(a)\n",
    "```\n",
    "\"\"\")"
   ]
  },
  {
   "cell_type": "markdown",
   "metadata": {},
   "source": [
    "Language specific syntax highlighting by Pandoc requires additional dependencies to render correctly."
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 29,
   "metadata": {
    "collapsed": false
   },
   "outputs": [
    {
     "data": {
      "application/javascript": [
       "\n",
       "var mdcell = new IPython.MarkdownCell();\n",
       "mdcell.create_element();\n",
       "mdcell.set_text('\\nsome source code\\n\\n```python\\na = \"test\"\\nprint(a)\\n```\\n');\n",
       "mdcell.render();\n",
       "$(element).append(mdcell.element)\n",
       ".removeClass()\n",
       ".css('left', '66%')\n",
       ".css('position', 'absolute')\n",
       ".css('width', '30%')\n",
       "mdcell.element.prepend(\n",
       "    $('<div />')\n",
       "    .removeClass()\n",
       "    .css('background', '#AAAAFF')\n",
       "    .css('width', '100 %')\n",
       "    .html('Notebook Output')\n",
       "\n",
       ");\n",
       "container.show()\n"
      ],
      "text/plain": [
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       "\\begin{Shaded}\n",
       "\\begin{Highlighting}[]\n",
       "\\NormalTok{a = }\\StringTok{\"test\"}\n",
       "\\KeywordTok{print}\\NormalTok{(a)}\n",
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       "<pre class=\"sourceCode python\"><code class=\"sourceCode python\">a = <span class=\"st\">&quot;test&quot;</span>\n",
       "<span class=\"kw\">print</span>(a)</code></pre></div></div>"
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    "compare_render(r\"\"\"\n",
    "some source code\n",
    "\n",
    "```python\n",
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    "print(a)\n",
    "```\n",
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